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By A. Lazinica

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Ratio of inter-SSE edges (r) as a function of the network size for the four classes of studied proteins. 3 Consequences During our study, we have identified a means to approximate the cumulative degree distribution of the SSE-IN. This function describes a power law regime followed by a sharp cut-off. The SSE-In studied are consequently truncated scale-free networks. The study of the hubs shows that certain amino acid play a central role independently of the protein classification. The nature of these hubs depends on their positions in the primary structure.

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Protein Eng Des Sel, Vol. 19, No. 6, pp. 265-275 Murzin, A. ; Brenner, S. ; Hubbard, T. & Chothia, C. (1995). SCOP: a structural classification of the protein database for the investigation of sequence and structures. J. Mol. , Vol. 247, pp. E. J. (2001). The strucuture of scientific collaboration networks. Proc. Natl. Acad. , Vol. 98, pp. 404-409 Newman, M. E. J. (2002). The structure and function of networks. , Vol. 147, pp. 40-45 Newman, M. E. ; Strogatz, S. H. & Watts, D. J. (2001). Random graphs with arbitrary degree distributions and their applications.

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